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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914096.1_cds_XP_016464130.1_57196
CDS Infomation

[gene=LOC107787118] [db_xref=GeneID:107787118] [protein=aspartic proteinase-like] [protein_id=XP_016464130.1] [location=join(149409..149771,149864..149924,157407..157501,157576..157688,157882..158050,158133..158172,158290..158354,159459..159572,159701..159765,159873..160026,160089..160208,161158..161246,161430..161514)] [gbkey=CDS]
Sequence

ATGGGAGCAAAAGCATTTCTTGTTGCTATGTTTCTCTCAGCACTGTTATTTCCTTTTGCC
TCCTCATCCAATGATGGCTTGATGAGAATTGGCTTGAAAAAAATGAAATTTGATCAAAAT
AATCGGCTTGCTGCACGCATTGAGTCAAAGGAAGGGGATGTTTTGAGGGGGTCGATTAGG
AAGTATAACTTCCGTGGTAAACTGGGGGACTTTGAGGATACAGACATTGTAGCATTGAAG
AACTATATGGATGCTCAATACTTTGGGGAGATTGGTGTAGGCACTCCACCTCAGAAGTTC
ACTGTAATCTTTGACACAGGTAGCTCGAATTTGTGGGTGCCGTCGTCGAAGTGCTATTTC
TCTGTTCCCTGTTTCTTTCATTCCAAGTACAAATCAAGTGAATCAAGTACTTATAAGAAG
AATGGGAAGTCTGCTGCAATTCAGTATGGTAGTGGAGCTATTTCTGGATTCTTCAGTCAA
GATAACGTCAAAGTTGGTGACCTTGTTGTAACAGATCAGGAATTTATTGAGGCAACCAGA
GAACCCAGCGTGACATTTTTGGTAGCCAAGTTTGACGGTATATTGGGTCTTGGATTCCAG
GAGATTTCAGTTGGAAATGCTGTTCCAGTGTGGTACAACATGGTCAAACAGGGTCTTATC
AAGGATCCTGTCTTCTCGTTTTGGCTCAACCGAAATACAGAGGAAGAACAAGGCGGAGAA
ATCGTATTTGGTGGGGTTGATCCTAATCACTATAAGGGAGAAATAACTTATGTTCCAGTC
ACACAGAAAGGTTATTGGCAGTTTGATATGGGTGATGTTCTTATCGATGGTAAAGCTACT
GGTTACTGTGAAAGTGGGTGCTCTGCAATAGCGGATTCAGGGACTTCTCTCTTGGCTGGT
CCAACGGCCATAATCACTATGATTAATCAAGCCATTGGAGCCTCTGGAGTTGCTAGCCAA
CAATGCAAATCTGTAGTGGAGCAGTACGGGCAGACGATCATGGATTTGCTGTTAGCAGAG
GCACATCCAAAGAAGATTTGTTCACAGGTTGGAGTATGCACCTTTGATGGAAACCGCGGA
GTTAGTATGGGAATTGACAGTGTTGTAGACGAGAAAGCTGGCAGATCCACAGGACTGCAG
GATGGTATGTGCTCTGCTTGTGAAATGGCGGTCATATGGATGGCGAATCAACTGAGACAA
AACCAGACTCAAGATCGCATATTAAACTATGTGAATGAGCTTTGCGAGCGTCTCCCAAGC
CCATTGGGGGAATCAGCTGTTGACTGTGGAAAGCTTTCTTCAATGCCTAAAGTCTCTTTC
ACAATTGGTGGCAAAGTGTTTGATCTCTCCCCAAATGAGTACATACTCAAGGTGGGCGAG
GGTGCTAAGGCACAATGTATTAGTGGTTTCACTGGCTTGGACATTCCTCCTCCCCGCGGA
CCTCTCTGGATCTTGGGTGATATTTTCATGGGTCGATATCACACAGTTTTCGATTATGGC
AAACTCAGAGTTGGATTTGCTGAAGCAGCTTAA

Peptide Sequence

PEP ID

XP_016464130.1
PEP Infomation

PREDICTED: aspartic proteinase-like [Nicotiana tabacum]
Sequence

MGAKAFLVAMFLSALLFPFASSSNDGLMRIGLKKMKFDQNNRLAARIESKEGDVLRGSIR
KYNFRGKLGDFEDTDIVALKNYMDAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSSKCYF
SVPCFFHSKYKSSESSTYKKNGKSAAIQYGSGAISGFFSQDNVKVGDLVVTDQEFIEATR
EPSVTFLVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIKDPVFSFWLNRNTEEEQGGE
IVFGGVDPNHYKGEITYVPVTQKGYWQFDMGDVLIDGKATGYCESGCSAIADSGTSLLAG
PTAIITMINQAIGASGVASQQCKSVVEQYGQTIMDLLLAEAHPKKICSQVGVCTFDGNRG
VSMGIDSVVDEKAGRSTGLQDGMCSACEMAVIWMANQLRQNQTQDRILNYVNELCERLPS
PLGESAVDCGKLSSMPKVSFTIGGKVFDLSPNEYILKVGEGAKAQCISGFTGLDIPPPRG
PLWILGDIFMGRYHTVFDYGKLRVGFAEAA

Transcript Sequence

Gene sequence data has not been registered.